Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61896131 | chr11:47111806 | G/T | 7.35E-12 | 288 | 25.4 | 31.87 | 10.82 | KM Plot |
| KIRP | rs61896132 | chr11:47113303 | C/T | 7.35E-12 | 288 | 25.4 | 31.87 | 10.82 | KM Plot |
| KIRP | rs61897776 | chr11:47133419 | C/G | 7.59E-7 | 288 | 25.4 | 32.17 | 12.63 | KM Plot |
| KIRP | rs61897777 | chr11:47133604 | C/G | 7.35E-12 | 288 | 25.4 | 31.87 | 10.82 | KM Plot |
| KIRP | rs61897782 | chr11:47150177 | G/A | 7.59E-7 | 288 | 25.4 | 32.17 | 12.63 | KM Plot |
| KIRP | rs61897784 | chr11:47154514 | A/G | 2.55E-6 | 286 | 25.4 | 31.57 | 12.63 | KM Plot |
| KIRP | rs61897786 | chr11:47167703 | C/G | 7.4E-12 | 288 | 25.4 | 29.8 | 10.82 | KM Plot |
| KIRP | rs61897788 | chr11:47181051 | A/T | 4.98E-6 | 288 | 25.57 | 29.8 | 12.63 | KM Plot |
| KIRP | rs61897791 | chr11:47186561 | T/G | 5.01E-6 | 286 | 25.82 | 26.57 | 12.63 | KM Plot |
| KIRP | rs61897843 | chr11:47187549 | G/A | 1.72E-6 | 284 | 25.58 | 28.03 | 12.63 | KM Plot |
| KIRP | rs61897858 | chr11:47235263 | A/T | 2.62E-8 | 289 | 25.58 | 26.57 | 13.07 | KM Plot |
| KIRP | rs61899284 | chr11:46986975 | C/T | 7.54E-12 | 288 | 25.57 | 28.03 | 10.82 | KM Plot |
| KIRP | rs61899285 | chr11:46996144 | C/T | 7.54E-12 | 288 | 25.57 | 28.03 | 10.82 | KM Plot |
| KIRP | rs61899293 | chr11:47038066 | A/G | 7.75E-12 | 288 | 25.57 | 28.03 | 10.82 | KM Plot |
| KIRP | rs61899294 | chr11:47044103 | T/C | 7.93E-12 | 288 | 25.57 | 28.03 | 10.82 | KM Plot |